BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H12SP1|AL428301
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig247 1674 0.0
>3x_Contig247
Length = 997
Score = 1674 bits (844), Expect = 0.0
Identities = 844/844 (100%)
Strand = Plus / Minus
Query: 1 attcccttccttcgagcgatatgtttcgaatttccgttggaatcttccacgtctccagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 attcccttccttcgagcgatatgtttcgaatttccgttggaatcttccacgtctccagtg 785
Query: 61 ttttagggttgttctcgcgcatacaattttaaaaaaaaaaaagtgaggccactgatatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ttttagggttgttctcgcgcatacaattttaaaaaaaaaaaagtgaggccactgatatca 725
Query: 121 ctacatgagatacagagacgggatcatgacagtttcttcaagtatgattcattatcgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ctacatgagatacagagacgggatcatgacagtttcttcaagtatgattcattatcgggg 665
Query: 181 attttgttgcggtcgtcaaaactgtaatataaacgggctgaaagattcatatataaactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 attttgttgcggtcgtcaaaactgtaatataaacgggctgaaagattcatatataaactc 605
Query: 241 tttaagatcaattcacttatatctggcaaatttcagttcgaaaactaaaagataagaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tttaagatcaattcacttatatctggcaaatttcagttcgaaaactaaaagataagaagc 545
Query: 301 gattacgttcggaaacagtattgatttactttaaggatagatacatgggaatcgacttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gattacgttcggaaacagtattgatttactttaaggatagatacatgggaatcgacttga 485
Query: 361 gtttgattttgggtaagcaggtaactttcccactattttgctacgtttcgtatcaattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtttgattttgggtaagcaggtaactttcccactattttgctacgtttcgtatcaattgt 425
Query: 421 ataaagatctggtttgtggcgatgcgaaacaaattaattccagtgtgaacattagtgacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ataaagatctggtttgtggcgatgcgaaacaaattaattccagtgtgaacattagtgacg 365
Query: 481 atgttttcgctgatgatattgataagaaaagtactgcgctaaaagataacggtgataagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atgttttcgctgatgatattgataagaaaagtactgcgctaaaagataacggtgataagc 305
Query: 541 aagaagagagatgggaacctgtgagtttcatgaaagacatccagccatctacagcagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aagaagagagatgggaacctgtgagtttcatgaaagacatccagccatctacagcagaaa 245
Query: 601 gggattacaaattatggttcgatacaccacctttcccttaccaacctttcaagcctggtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gggattacaaattatggttcgatacaccacctttcccttaccaacctttcaagcctggtg 185
Query: 661 aatacagattaacaatgggtgtaaggccgatgccaaatgaatattggctagtgtttgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aatacagattaacaatgggtgtaaggccgatgccaaatgaatattggctagtgtttgaaa 125
Query: 721 gcactcttaaagatagaatagaaaagaagtgggatgtgatcaaaaataattacaaggatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcactcttaaagatagaatagaaaagaagtgggatgtgatcaaaaataattacaaggatg 65
Query: 781 tgatataccatttggatcccgctatgattaattgcactacttatgataatgcagctatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgatataccatttggatcccgctatgattaattgcactacttatgataatgcagctatca 5
Query: 841 caga 844
||||
Sbjct: 4 caga 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,989
Number of Sequences: 1807
Number of extensions: 12989
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)